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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs66487175 chr2:75970996 G/T 5.38E-6 1019 21.38 23.13 18.48 KM Plot
BRCA rs66621989 chr7:130289509 G/A 3.46E-5 1019 22.18 20.17 17.93 KM Plot
BRCA rs6748079 chr2:86500075 G/A 2.61E-6 1025 21.97 19.47 12.17 KM Plot
BRCA rs67630216 chr20:2769931 T/C 1.24E-5 1009 22 21 11.5 KM Plot
BRCA rs6814640 chr4:169262542 T/C 1.45E-5 1013 21.67 21.93 14.1 KM Plot
BRCA rs6910725 chr6:20536879 G/A 4.26E-9 1023 21.57 21.77 8.87 KM Plot
BRCA rs7069305 chr10:70409804 A/G 1.03E-7 1028 22.3 19.67 18.77 KM Plot
BRCA rs7078827 chr10:70414995 A/T 5.47E-5 1011 23.55 19.23 14 KM Plot
BRCA rs7095203 chr10:16590759 C/T 5.81E-6 1028 12.85 19.67 23.57 KM Plot
BRCA rs7097157 chr10:70415152 T/A 5.16E-5 1014 23.53 19.1 14.93 KM Plot
BRCA rs71019046 chr10:70410302 CG/C 5.98E-7 1016 22.03 19.47 20.47 KM Plot
BRCA rs7180789 chr15:71644431 A/G 0 1028 21.62 21.17 7.97 KM Plot
BRCA rs7231881 chr18:47475917 C/G 5.38E-8 1028 22.03 18.8 18.6 KM Plot
BRCA rs7250849 chr19:52158316 A/C 1.91E-8 1028 20.95 21.43 21.77 KM Plot
BRCA rs7255319 chr19:52167906 C/G 1.49E-5 1028 21.47 21.3 22 KM Plot